Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890342.1_cds_XP_016445022.1_40020
CDS Infomation

[gene=LOC107770247] [db_xref=GeneID:107770247] [protein=two-component response regulator ORR24-like isoform X4] [protein_id=XP_016445022.1] [location=join(147692..147824,147936..148352,148454..148530,150153..151055,152119..152199,152297..152377)] [gbkey=CDS]
Sequence

ATGGATGCTTTGTCTATACTTCGGATCAAAGGTGGCTCTTTTGATCTCGTTGTCGTCGAT
GTGCACATGCCTGATATGAATGGCTTTGAACTTCAACAAGTGATAACCAACGAATTTGAG
CTACCTGTTGTTTTGATGTCAGCTGATGACAAAGAAGGTACGATCCTGAAAGGACTAGAC
GGTGGGGCTGCATTTTTCCTTGTTAAGCCTATATCAGTAGATGATCTAAGAGATCTATGG
CAGTACGCACTGTTGCAGAAGAAGAAAGGTAAAAGAGTTGTTCTTGAGGAAATCGATTGT
TTGGAGAAAAGTTCCAATTGCAATAAGAAAAGCCTTCATGAAGTCGGGGAGTCTGTATCA
TCTATCAATGAAAATTGCTATCAACATATCAAGAAGGAAAAATCTAAGAGGAAATCTGCA
AGAACACAGAGGAATGCTGATAAAGATAACAGTGGTAATTCTGCTGCACCATTTAAAAAG
GCTAAGGTTGTGTGGACAAATTCACTACACAACAAGTTCTTGGAAGCCATCAGAGACATT
GGATTTGACAAAGCTGTGCCAAAAAAGATTCTTGATCAAATGAAAGTCCCTGGATTAACT
AGAGAAAATGTCGCCAGCCATTTGCAGAAATATCGTATTTTCTTGGAACGAGTCTCTGAT
GCATGCTGTAGAATACAAGCTGCTGACACAAGCTTAGGAATGCTCAGTCAGGAAAAATTT
GGACTGCAGAAACAGTTCTCTGAAAACACCACTAACCCCCGGTCATTGATTCACACTGCA
AACAATGGCAGTTCGTCTTTCAGAACCCAGCAAACAAGACAAACTATACCGTCAGGATAT
GAACAAGCACAGTTGTTTCTCAATGAAGATAATTTGGGTAATATAACACATAGCAATGAG
AATCCACTGTATAAGGCTAATCAGTTGCCTAGCACAATGAAAGCAAAAAACTATCAAACG
GGATCATCGGCTTATGAAGATATTTCATCTCAGCTCATGAATGGTACTACTTCAACTCAA
GTTCGTAGAATGCTTTCTGGAAATCCTGCCAATAGGTTATCTGGTAGGAACTTACTAGCA
TTAGGGACCAATGGTATCACAATGCACGCTACCCTTAACGGAAATTTGAACTTTCTTCGT
GATGGCTTTGCTGATGACCAATGTGGTACCAATTTCACCCAAAATAACGATGCTGATGAG
GCATCTACTCTTTTTACTGGTCACATGAACGTCATTGGTAAAAGTCAACATGACTCTGAA
CAATGTTTGGCTCAAGAGGCATCTTCTTCGGATGGATTTGATGGAGAAAAGCAATGCTCC
GCCATATTGTCTGATCATATTGATGAAGAAACTTATATGCAACTGCCATCATTTGTTAAC
GGTGTTTGCAGGGGGCAAGAAGTCGATGCTATGCTCGATCCGGTTTGTAACTTCTCTGAG
TTTCACAACACTAATGCTACGCAGCAATCACGAGGCATTGGTGATCTTAGTGTTTCTTTC
GTGAATCAAGGGAACGTTCTACCTCATCAGCAACAAGACCACATAGGTCATACCGAACCT
GCGGAGGATGGCATGTCTCAGCTTCATAATGTCTTCTCATATCCTACTGAGCAATGTAAA
GATGAAGAGTTTTTGGAGCTGGTACTTGCTTCAAGCCCTTATGAAGATGATCAAAACCCA
GACGGACTTTAA

Peptide Sequence

PEP ID

XP_016445022.1
PEP Infomation

PREDICTED: two-component response regulator ORR24-like isoform X4 [Nicotiana tabacum]
Sequence

MDALSILRIKGGSFDLVVVDVHMPDMNGFELQQVITNEFELPVVLMSADDKEGTILKGLD
GGAAFFLVKPISVDDLRDLWQYALLQKKKGKRVVLEEIDCLEKSSNCNKKSLHEVGESVS
SINENCYQHIKKEKSKRKSARTQRNADKDNSGNSAAPFKKAKVVWTNSLHNKFLEAIRDI
GFDKAVPKKILDQMKVPGLTRENVASHLQKYRIFLERVSDACCRIQAADTSLGMLSQEKF
GLQKQFSENTTNPRSLIHTANNGSSSFRTQQTRQTIPSGYEQAQLFLNEDNLGNITHSNE
NPLYKANQLPSTMKAKNYQTGSSAYEDISSQLMNGTTSTQVRRMLSGNPANRLSGRNLLA
LGTNGITMHATLNGNLNFLRDGFADDQCGTNFTQNNDADEASTLFTGHMNVIGKSQHDSE
QCLAQEASSSDGFDGEKQCSAILSDHIDEETYMQLPSFVNGVCRGQEVDAMLDPVCNFSE
FHNTNATQQSRGIGDLSVSFVNQGNVLPHQQQDHIGHTEPAEDGMSQLHNVFSYPTEQCK
DEEFLELVLASSPYEDDQNPDGL

Transcript Sequence

Gene sequence data has not been registered.